4DBL
Crystal structure of E159Q mutant of BtuCDF
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | BtuC-like | 8018502 | 3000523 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | BtuC-like | 8018502 | 3000523 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | BtuC-like | 8018502 | 3000523 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | BtuC-like | 8018502 | 3000523 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | ABC transporter-like P-loop ATPases | 8058248 | 3002020 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | ABC transporter-like P-loop ATPases | 8058248 | 3002020 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | ABC transporter-like P-loop ATPases | 8058248 | 3002020 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | ABC transporter-like P-loop ATPases | 8058248 | 3002020 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Helical backbone metal receptor | 8044007 | 3001679 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Helical backbone metal receptor | 8044007 | 3001679 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FecCD_1 | e4dblA1 | A: alpha bundles | X: Type II ABC importer transmembrane domain fold (From Topology) | H: Type II ABC importer transmembrane domain fold (From Topology) | T: Type II ABC importer transmembrane domain fold | F: FecCD_1 | ECOD (1.6) |
B | FecCD_1 | e4dblB1 | A: alpha bundles | X: Type II ABC importer transmembrane domain fold (From Topology) | H: Type II ABC importer transmembrane domain fold (From Topology) | T: Type II ABC importer transmembrane domain fold | F: FecCD_1 | ECOD (1.6) |
F | FecCD_1 | e4dblF1 | A: alpha bundles | X: Type II ABC importer transmembrane domain fold (From Topology) | H: Type II ABC importer transmembrane domain fold (From Topology) | T: Type II ABC importer transmembrane domain fold | F: FecCD_1 | ECOD (1.6) |
G | FecCD_1 | e4dblG1 | A: alpha bundles | X: Type II ABC importer transmembrane domain fold (From Topology) | H: Type II ABC importer transmembrane domain fold (From Topology) | T: Type II ABC importer transmembrane domain fold | F: FecCD_1 | ECOD (1.6) |
C | ABC_tran | e4dblC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_tran | ECOD (1.6) |
D | ABC_tran | e4dblD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_tran | ECOD (1.6) |
H | ABC_tran | e4dblH1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_tran | ECOD (1.6) |
I | ABC_tran | e4dblI1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_tran | ECOD (1.6) |
E | Peripla_BP_2_N | e4dblE1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Peripla_BP_2_N | ECOD (1.6) |
J | Peripla_BP_2_N | e4dblJ1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Peripla_BP_2_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01032 | FecCD transport family (FecCD) | FecCD transport family | - | Family | |
PF00005 | ABC transporter (ABC_tran) | ABC transporter | ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ... | Domain | |
PF01497 | Periplasmic binding protein (Peripla_BP_2) | Periplasmic binding protein | This is sensor domain found in bacterial periplasmic binding proteins, several of which are involved in iron and cobalamin transport [1,2,3]. Among its ligands are siderophores bacillibactin, enterobactin and iron(III)-hydroxamates (Matilla et. al., ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR037294 | ABC transporter, BtuC-like | Homologous Superfamily | |
IPR000522 | ABC transporter, permease protein, BtuC-like | Family | |
IPR023691 | ABC transporter, vitamin B12 import, permease protein BtuC | Family | |
IPR017871 | ABC transporter-like, conserved site | Conserved Site | |
IPR050153 | Metal Ion Import ATP-binding | Family | |
IPR003439 | ABC transporter-like, ATP-binding domain | Domain | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR023693 | ABC transporter, vitamin B12, BtuD | Family | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR051030 | Vitamin B12-binding component of ABC transporter | Family | |
IPR023544 | ABC transporter, vitamin B12-binding protein | Family | |
IPR002491 | ABC transporter periplasmic binding domain | Domain |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | ABC transporters | FecCD transport family |