4C8R
Human gamma-butyrobetaine dioxygenase (BBOX1) in complex with Ni(II) and N-(3-hydroxypicolinoyl)-S-(pyridin-2-ylmethyl)-L-cysteine (AR692B)
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | NE0471 N-terminal domain-like | 8106684 | 3000231 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Clavaminate synthase-like | 8106688 | 3001848 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | NE0471 N-terminal domain-like | 8106684 | 3000231 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Clavaminate synthase-like | 8106688 | 3001848 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Clavaminate synthase-like | 8106688 | 3001848 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | NE0471 N-terminal domain-like | 8106684 | 3000231 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Clavaminate synthase-like | 8106688 | 3001848 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | NE0471 N-terminal domain-like | 8106684 | 3000231 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Clavaminate synthase-like | 8106688 | 3001848 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | NE0471 N-terminal domain-like | 8106684 | 3000231 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Clavaminate synthase-like | 8106688 | 3001848 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | NE0471 N-terminal domain-like | 8106684 | 3000231 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DUF971 | e4c8rA2 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: NE0471 N-terminal domain-like (From Topology) | T: NE0471 N-terminal domain-like | F: DUF971 | ECOD (1.6) |
A | TauD | e4c8rA1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: TauD | ECOD (1.6) |
B | DUF971 | e4c8rB2 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: NE0471 N-terminal domain-like (From Topology) | T: NE0471 N-terminal domain-like | F: DUF971 | ECOD (1.6) |
B | TauD | e4c8rB1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: TauD | ECOD (1.6) |
C | DUF971 | e4c8rC2 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: NE0471 N-terminal domain-like (From Topology) | T: NE0471 N-terminal domain-like | F: DUF971 | ECOD (1.6) |
C | TauD | e4c8rC1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: TauD | ECOD (1.6) |
D | DUF971 | e4c8rD2 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: NE0471 N-terminal domain-like (From Topology) | T: NE0471 N-terminal domain-like | F: DUF971 | ECOD (1.6) |
D | TauD | e4c8rD1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: TauD | ECOD (1.6) |
E | DUF971 | e4c8rE2 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: NE0471 N-terminal domain-like (From Topology) | T: NE0471 N-terminal domain-like | F: DUF971 | ECOD (1.6) |
E | TauD | e4c8rE1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: TauD | ECOD (1.6) |
F | DUF971 | e4c8rF2 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: NE0471 N-terminal domain-like (From Topology) | T: NE0471 N-terminal domain-like | F: DUF971 | ECOD (1.6) |
F | TauD | e4c8rF1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: TauD | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02668 | Taurine catabolism dioxygenase TauD, TfdA family (TauD) | Taurine catabolism dioxygenase TauD, TfdA family | This family consists of taurine catabolism dioxygenases of the TauD, TfdA family. TauD from E. coli Swiss:P37610 is a alpha-ketoglutarate-dependent taurine dioxygenase [1]. This enzyme catalyses the oxygenolytic release of sulfite from taurine [1]. ... | Domain | |
PF06155 | Gamma-butyrobetaine hydroxylase-like, N-terminal (GBBH-like_N) | Gamma-butyrobetaine hydroxylase-like, N-terminal | This domain is found in several proteins including gamma-butyrobetaine dioxygenase, Fe-S cluster assembly factor HCF101 and trimethyllysine dioxygenase proteins. Gamma-butyrobetaine hydroxylase (GBBH) is a alpha-ketoglutarate-dependent dioxygenase ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003819 | TauD/TfdA-like domain | Domain | |
IPR010376 | Gamma-butyrobetaine hydroxylase-like, N-terminal | Domain | |
IPR042098 | Taurine dioxygenase TauD-like superfamily | Homologous Superfamily | |
IPR038492 | GBBH-like, N-terminal domain superfamily | Homologous Superfamily | |
IPR012775 | Gamma-butyrobetaine hydroxylase-like | Family | |
IPR050411 | Alpha-ketoglutarate-dependent hydroxylases | Family |