3G5B
The structure of UNC5b cytoplasmic domain
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | UPA domain-like | 8046642 | 4005210 | SCOP2 (2022-06-29) |
A | SCOP2 Family | ZU5 domain | 8048256 | 4000379 | SCOP2 (2022-06-29) |
A | SCOP2 Family | DEATH domain, DD | 8102954 | 4000378 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | UPA domain-like | 8102973 | 3002775 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | ZU5 domain-like | 8102948 | 3002026 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | DEATH domain | 8102955 | 3000069 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UPA | e3g5bA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: UPA domain | F: UPA | ECOD (1.6) |
A | ZU5 | e3g5bA1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology) | T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | F: ZU5 | ECOD (1.6) |
A | Death | e3g5bA3 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: Death | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00791 | ZU5 domain (ZU5) | ZU5 domain | - | Family | |
PF00531 | Death domain (Death) | Death domain | - | Domain | |
PF17217 | UPA domain (UPA) | UPA domain | The UPA domain is conserved in UNC5, PIDD, and Ankyrins. It has a beta sandwich structure [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000884 | Thrombospondin type-1 (TSP1) repeat | Repeat | |
IPR011029 | Death-like domain superfamily | Homologous Superfamily | |
IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily | |
IPR003598 | Immunoglobulin subtype 2 | Domain | |
IPR037936 | Netrin receptor UNC5 | Family | |
IPR042156 | UNC5B, death domain | Domain | |
IPR036383 | Thrombospondin type-1 (TSP1) repeat superfamily | Homologous Superfamily | |
IPR033772 | UPA domain | Domain | |
IPR000488 | Death domain | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR003599 | Immunoglobulin domain subtype | Domain | |
IPR007110 | Immunoglobulin-like domain | Domain | |
IPR013098 | Immunoglobulin I-set | Domain | |
IPR000906 | ZU5 domain | Domain |