3BFM
Crystal structure of a biotin protein ligase-like protein of unknown function (tm1040_0394) from silicibacter sp. tm1040 at 1.70 A resolution
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Biotin holoenzyme synthetase-like | 8046340 | 4000262 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Class II aaRS and biotin synthetases | 8050161 | 3000058 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Transcriptional regulator domain | 8095899 | 3000121 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DUF4444 | e3bfmA2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4444 | ECOD (1.6) |
A | BPL_LplA_LipB | e3bfmA1 | A: a+b three layers | X: Class II aaRS and biotin synthetases (From Topology) | H: Class II aaRS and biotin synthetases (From Topology) | T: Class II aaRS and biotin synthetases | F: BPL_LplA_LipB | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.930.10 | Alpha Beta | 2-Layer Sandwich | BirA Bifunctional Protein | domain 2 | CATH (4.3.0) |
A | 2.30.30.100 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16917 | Biotin/lipoate A/B protein ligase family (BPL_LplA_LipB_2) | Biotin/lipoate A/B protein ligase family | - | Domain | |
PF14563 | Domain of unknown function (DUF4444) (DUF4444) | Domain of unknown function (DUF4444) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Biotin protein ligase-like protein of unknown function | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004143 | Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain | Domain | |
IPR045864 | Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) | Homologous Superfamily | |
IPR028044 | Domain of unknown function DUF4444 | Domain |