2R9V
Crystal structure of ATP synthase subunit alpha (TM1612) from Thermotoga maritima at 2.10 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2r9va3 | All alpha proteins | Left-handed superhelix | C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases | automated matches | automated matches | (Thermotoga maritima MSB8 ) [TaxId: 243274 ], | SCOPe (2.08) |
A | d2r9va1 | All beta proteins | Domain of alpha and beta subunits of F1 ATP synthase-like | N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases | automated matches | automated matches | (Thermotoga maritima MSB8 ) [TaxId: 243274 ], | SCOPe (2.08) |
A | d2r9va2 | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | automated matches | automated matches | (Thermotoga maritima MSB8 ) [TaxId: 243274 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | ATP synthase alpha/beta N-terminal domain-like | 8056899 | 4002275 | SCOP2 (2022-06-29) |
A | SCOP2 Family | ATP synthase nucleotide-binding domain-like | 8056901 | 4004011 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056900 | 3001034 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | RecA-like P-loop NTPases | 8056902 | 3002019 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056903 | 3000684 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | ATP-synt_ab_N | e2r9vA3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
A | ATP-synt_ab_C | e2r9vA2 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
A | ATP-synt_ab | e2r9vA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.30.20 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
A | 1.20.150.20 | Mainly Alpha | Up-down Bundle | Lysin | ATP synthase alpha/beta chain, C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |
PF00306 | ATP synthase alpha/beta chain, C terminal domain (ATP-synt_ab_C) | ATP synthase alpha/beta chain, C terminal domain | - | Domain | |
PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |