Crystal structure of the DegS protease in complex with the YWF activating peptide
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
C | d2r3yc1 | All beta proteins | PDZ domain-like | PDZ domain-like | HtrA-like serine proteases | Stress sensor protease DegS, C-terminal domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
C | d2r3yc2 | All beta proteins | Trypsin-like serine proteases | Trypsin-like serine proteases | Prokaryotic proteases | Stress sensor protease DegS, catalytic domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d2r3ya1 | All beta proteins | PDZ domain-like | PDZ domain-like | HtrA-like serine proteases | Stress sensor protease DegS, C-terminal domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d2r3ya2 | All beta proteins | Trypsin-like serine proteases | Trypsin-like serine proteases | Prokaryotic proteases | Stress sensor protease DegS, catalytic domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B | d2r3yb1 | All beta proteins | PDZ domain-like | PDZ domain-like | HtrA-like serine proteases | Stress sensor protease DegS, C-terminal domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B | d2r3yb2 | All beta proteins | Trypsin-like serine proteases | Trypsin-like serine proteases | Prokaryotic proteases | Stress sensor protease DegS, catalytic domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
C | SCOP2B Superfamily | Trypsin-like serine proteases | 8042458 | 3000114 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Trypsin-like serine proteases | 8042458 | 3000114 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Trypsin-like serine proteases | 8042458 | 3000114 | SCOP2B (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
C | Trypsin_2 | e2r3yC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Trypsin_2 | ECOD (1.6) |
C | PDZ_2 | e2r3yC2 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PDZ_2 | ECOD (1.6) |
A | Trypsin_2 | e2r3yA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Trypsin_2 | ECOD (1.6) |
A | PDZ_2 | e2r3yA2 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PDZ_2 | ECOD (1.6) |
B | Trypsin_2 | e2r3yB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Trypsin_2 | ECOD (1.6) |
B | PDZ_2 | e2r3yB2 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PDZ_2 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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| Protease degS | | | |
| Synthetic peptide YWF | - | - | - |