2ODD
Solution structure of the MYND domain from AML1-ETO complexed with SMRT, a corepressor
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | d2odda_ | Small proteins | HIT/MYND zinc finger-like | HIT/MYND zinc finger-like | MYND zinc finger | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | zf-MYND | e2oddA1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: HIT/MYND zinc finger-like (From Topology) | T: HIT/MYND zinc finger-like | F: zf-MYND | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth A] | 6.10.140.2220 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth A] | PF01753 | MYND finger (zf-MYND) | MYND finger | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B] | IPR017930 | Myb domain | Domain |
A [auth B] | IPR051571 | Nuclear receptor corepressor | Family |
A [auth B] | IPR009057 | Homedomain-like superfamily | Homologous Superfamily |
A [auth B] | IPR031557 | N-CoR, GPS2-interacting domain | Domain |
A [auth B] | IPR017884 | SANT domain | Domain |
A [auth B] | IPR001005 | SANT/Myb domain | Domain |
B [auth A] | IPR002893 | Zinc finger, MYND-type | Domain |
B [auth A] | IPR003894 | TAFH/NHR1 | Domain |
B [auth A] | IPR013289 | CBFA2T family | Family |
B [auth A] | IPR013290 | Protein CBFA2T1 | Family |
B [auth A] | IPR014896 | NHR2-like | Domain |
B [auth A] | IPR037249 | TAFH/NHR1 domain superfamily | Homologous Superfamily |