2NXN

T. thermophilus ribosomal protein L11 methyltransferase (PrmA) in complex with ribosomal protein L11

Domain Annotation: SCOP Classification SCOP Database (version: 2.0) Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species
A	d2nxna1	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	Ribosomal protein L11 methyltransferase PrmA	PrmA-like protein TTHA0656 (TT0836)	(Thermus thermophilus HB8 ) [TaxId: 300852 ]
B	d2nxnb1	All alpha proteins	DNA/RNA-binding 3-helical bundle	Ribosomal protein L11, C-terminal domain	Ribosomal protein L11, C-terminal domain	Ribosomal protein L11, C-terminal domain	(Thermus thermophilus HB8 ) [TaxId: 300852 ]
B	d2nxnb2	Alpha and beta proteins (a+b)	Ribosomal L11/L12e N-terminal domain	Ribosomal L11/L12e N-terminal domain	Ribosomal L11/L12e N-terminal domain	Ribosomal protein L11, N-terminal domain	(Thermus thermophilus HB8 ) [TaxId: 300852 ]

Domain Annotation: CATH CATH Database (version 4.2.0) Homepage

Chain	Domain	Class	Architecture	Topology	Homology
A	3.30.70.1170	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Sun protein
A	1.20.5.1350	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces
A	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39
B	3.30.1550.10	Alpha Beta	2-Layer Sandwich	Ribosomal protein L11, N-terminal domain	Ribosomal protein L11/L12, N-terminal domain
B	1.10.10.250	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Ribosomal protein L11/L12, C-terminal domain

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Identifier	Description	Comments	Source
B	PF03946	Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)	Ribosomal protein L11, N-terminal domain	The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.	Domain
B	PF00298	Ribosomal protein L11, RNA binding domain (Ribosomal_L11)	Ribosomal protein L11, RNA binding domain	-	Domain

Gene Product Annotation Gene Product Annotation

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Ribosomal protein L11 methyltransferase	catalytic activity methyltransferase activity protein methyltransferase activity transferase activity transferase activity, transferring one-carbon groups catalytic activity, acting on a protein		intracellular anatomical structure cytoplasm cellular anatomical entity
B	50S ribosomal protein L11	nucleic acid binding RNA binding binding rRNA binding large ribosomal subunit rRNA binding organic cyclic compound binding heterocyclic compound binding structural constituent of ribosome structural molecule activity		intracellular anatomical structure ribosome organelle non-membrane-bounded organelle intracellular organelle intracellular non-membrane-bounded organelle cellular anatomical entity

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.