2NBB
NMR structure of the Acidic domain of SYNCRIP (24-140)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | HNRPQ acidic domain-like | 8076835 | 3002463 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF18360 | e2nbbA1 | A: alpha arrays | X: Heterogeneous nuclear ribonucleoprotein Q acidic domain (From Topology) | H: Heterogeneous nuclear ribonucleoprotein Q acidic domain (From Topology) | T: Heterogeneous nuclear ribonucleoprotein Q acidic domain | F: PF18360 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18360 | Heterogeneous nuclear ribonucleoprotein Q acidic domain (hnRNP_Q_AcD) | Heterogeneous nuclear ribonucleoprotein Q acidic domain | This is an acidic sequence segment domain found in the splicing factor SYNCRIP (hnRNP Q) which is involved in viral replication, neural morphogenesis, modulation of circadian oscillation and the regulation of the cytidine deaminase APOBEC1. This doma ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR034544 | Heterogeneous nuclear ribonucleoprotein Q, RNA recognition motif 1 | Domain | |
IPR006535 | HnRNP R/Q splicing factor | Family | |
IPR041337 | Heterogeneous nuclear ribonucleoprotein Q acidic domain | Domain | |
IPR000504 | RNA recognition motif domain | Domain | |
IPR034548 | Heterogeneous nuclear ribonucleoprotein Q, RNA recognition motif 2 | Domain | |
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily | |
IPR035979 | RNA-binding domain superfamily | Homologous Superfamily |