2AXV
Structure of PrgX Y153C mutant
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | TPR-like | 8037422 | 3001345 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8037421 | 3000119 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | TPR-like | 8037422 | 3001345 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8037421 | 3000119 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8037421 | 3000119 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | TPR-like | 8037422 | 3001345 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8037421 | 3000119 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | TPR-like | 8037422 | 3001345 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01381 | e2axvA1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: PF01381 | ECOD (1.6) |
A | PF22459 | e2axvA2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF22459 | ECOD (1.6) |
B | PF01381 | e2axvB1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: PF01381 | ECOD (1.6) |
B | PF22459 | e2axvB2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF22459 | ECOD (1.6) |
C | PF01381 | e2axvC1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: PF01381 | ECOD (1.6) |
C | PF22459 | e2axvC2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF22459 | ECOD (1.6) |
D | PF01381 | e2axvD1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: PF01381 | ECOD (1.6) |
D | PF22459 | e2axvD2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF22459 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01381 | Helix-turn-helix (HTH_3) | Helix-turn-helix | This large family of DNA binding helix-turn helix proteins includes Cro Swiss:P03036 and CI Swiss:P03034. Within the protein Swiss:Q5F9C2, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be ... | Domain | |
PF21259 | HTH-type transcriptional regulator Rgg, C-terminal domain (Rgg_C) | HTH-type transcriptional regulator Rgg, C-terminal domain | This domain is found at the C-terminal end of HTH-type transcriptional regulator Rgg from Streptococcus gordonii, and similar proteins predominantly found in Firmicutes. Rgg is a peptide pheromone receptor that directly binds pheromones transported t ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001387 | Cro/C1-type helix-turn-helix domain | Domain | |
IPR010057 | HTH-type transcriptional regulator Rgg, C-terminal domain | Domain | |
IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily | |
IPR010982 | Lambda repressor-like, DNA-binding domain superfamily | Homologous Superfamily |