1KFS


DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX


Domain Annotation: SCOP Classification SCOP Database (version: 2.0) Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpecies
Bd1kfsa1 Alpha and beta proteins (a/b) Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Exonuclease domain of prokaryotic DNA polymerase (Escherichia coli ) [TaxId: 562 ]
Bd1kfsa2 Multi-domain proteins (alpha and beta) DNA/RNA polymerases DNA/RNA polymerases DNA polymerase I DNA polymerase I (Klenow fragment) (Escherichia coli ) [TaxId: 562 ]

Domain Annotation: CATH CATH Database (version 4.2.0) Homepage

ChainDomainClassArchitectureTopologyHomology
B3.30.420.10 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5
B1.20.1060.10 Mainly Alpha Up-down Bundle Taq DNA Polymerase Chain T, domain 4
B3.30.70.370 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
B3.30.70.370 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
B1.10.150.20 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1

Protein Family Annotation Pfam Database Homepage

ChainsAccessionIdentifierDescriptionCommentsSource
BPF016123'-5' exonuclease (DNA_pol_A_exo1)3'-5' exonucleaseThis domain is responsible for the 3'-5' exonuclease proofreading activity of E. coli DNA polymerase I (polI) and other enzymes, it catalyses the hydrolysis of unpaired or mismatched nucleotides. This domain consists of the amino-terminal half of the ...This domain is responsible for the 3'-5' exonuclease proofreading activity of E. coli DNA polymerase I (polI) and other enzymes, it catalyses the hydrolysis of unpaired or mismatched nucleotides. This domain consists of the amino-terminal half of the Klenow fragment in E. coli polI it is also found in the Werner syndrome helicase (WRN), focus forming activity 1 protein (FFA-1) and ribonuclease D (RNase D). Werner syndrome is a human genetic disorder causing premature aging; the WRN protein has helicase activity in the 3'-5' direction [4,5]. The FFA-1 protein is required for formation of a replication foci and also has helicase activity; it is a homologue of the WRN protein [3]. RNase D is a 3'-5' exonuclease involved in tRNA processing. Also found in this family is the autoantigen PM/Scl thought to be involved in polymyositis-scleroderma overlap syndrome.
Domain
BPF027395'-3' exonuclease, N-terminal resolvase-like domain (5_3_exonuc_N)5'-3' exonuclease, N-terminal resolvase-like domain- Domain
BPF013675'-3' exonuclease, C-terminal SAM fold (5_3_exonuc)5'-3' exonuclease, C-terminal SAM fold- Domain
BPF00476DNA polymerase family A (DNA_pol_A)DNA polymerase family A- Family

Gene Product Annotation Gene Product Annotation

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
BDNA (5'-D(*GP*CP*TP*TP*AP*CP*G)-3')none none none
APROTEIN (DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7))