1MFQ
Crystal Structure Analysis of a Ternary S-Domain Complex of Human Signal Recognition Particle
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | d1mfqc_ | All alpha proteins | Signal peptide-binding domain | Signal peptide-binding domain | Signal peptide-binding domain | SRP54M | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d1mfqb_ | Alpha and beta proteins (a+b) | SRP19 | SRP19 | SRP19 | SRP19 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 1.10.260.30 | Mainly Alpha | Orthogonal Bundle | 434 Repressor (Amino-terminal Domain) | Signal recognition particle, SRP54 subunit, M-domain | CATH (4.3.0) |
B | 3.30.56.30 | Alpha Beta | 2-Layer Sandwich | Phenylalanyl-tRNA Synthetase | Chain B, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02978 | Signal peptide binding domain (SRP_SPB) | Signal peptide binding domain | - | Domain | |
PF01922 | SRP19 protein (SRP19) | SRP19 protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000897 | Signal recognition particle, SRP54 subunit, GTPase domain | Domain | |
IPR004125 | Signal recognition particle, SRP54 subunit, M-domain | Domain | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR013822 | Signal recognition particle SRP54, helical bundle | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR022941 | Signal recognition particle, SRP54 subunit | Family | |
IPR036225 | SRP/SRP receptor, N-terminal | Homologous Superfamily | |
IPR042101 | Signal recognition particle SRP54, N-terminal domain superfamily | Homologous Superfamily | |
IPR006325 | Signal recognition particle, SRP54 subunit, eukaryotic | Family | |
IPR036891 | Signal recognition particle, SRP54 subunit, M-domain superfamily | Homologous Superfamily | |
IPR002778 | Signal recognition particle, SRP19 subunit | Family | |
IPR036521 | Signal recognition particle, subunit SRP19-like superfamily | Homologous Superfamily |