YOD1 - YOD1 deubiquitinase

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 3 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q5VVQ6 HGNC Approved Gene Symbol: YOD1 
Ensembl ENSG00000180667 
Synonyms : DKFZp451J1719, OTUD2, DUBA8 Previous Names: "YOD1 OTU deubiquinating enzyme 1 homolog ( yeast)", "YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)"
HgncId : HGNC:25035  Omim: 612023 
Refseq: NM_018566 
 
Genomic coordinates: Cytogenetic location: 1q32.1 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

YOD1 Gene Structure

Chromosome: chr1
Genbank ID: NM_018566 Orientation: -
Length coding sequence : 1044 nucleotides.
Regionstartendregion lengthphase at end
UTR
207,224,376207,224,422
Exon207,224,033207,224,3753431
Exon207,222,365207,223,0687040
UTR
207,217,194207,222,364