VPS35 - VPS35, retromer complex component

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 8 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q96QK1 HGNC Approved Gene Symbol: VPS35 
Ensembl ENSG00000069329 
Synonyms : FLJ10752, MEM3, PARK17 Previous Names: "vacuolar protein sorting 35 homolog (S. cerevisiae)"
HgncId : HGNC:13487  Omim: 601501 
GenBank: AF175265 
 
Genomic coordinates: Cytogenetic location: 16q11.2 reset view
Fullscreen
Dalliance goes here...

This feature requires an up-to-date web browser.

Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

VPS35 Gene Structure

Chromosome: chr16
Genbank ID: NM_018206 Orientation: -
Length coding sequence : 2388 nucleotides.
Regionstartendregion lengthphase at end
UTR
46,723,04646,723,144
Exon46,723,04346,723,04530
Exon46,717,42046,717,518990
Exon46,715,99146,716,087971
Exon46,715,28946,715,4121242
Exon46,714,58346,714,7651832
Exon46,712,85546,713,0682140
Exon46,711,22746,711,310840
Exon46,710,49546,710,6041102
Exon46,708,47646,708,572970
Exon46,708,22646,708,3741492
Exon46,706,17746,706,3842080
Exon46,705,61746,705,7721560
Exon46,702,84246,702,9641230
Exon46,696,89546,697,0741800
Exon46,696,15546,696,3942400
Exon46,695,63046,695,7731440
Exon46,694,38446,694,5631800
UTR
46,691,89146,694,383