TNRC6C - trinucleotide repeat containing 6C

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 3 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9HCJ0  HGNC Approved Gene Symbol: TNRC6C 
Ensembl ENSG00000078687 
Synonyms : KIAA1582, FLJ20015
HgncId : HGNC:29318  Omim: 610741 
Refseq: NM_018996  GenBank: AL834429 
 
Genomic coordinates: Cytogenetic location: 17q25.3 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

TNRC6C Gene Structure

Chromosome: chr17
Genbank ID: NM_018996 Orientation: +
Length coding sequence : 5070 nucleotides.
Regionstartendregion lengthphase at end
UTR76,044,92576,045,143
Exon76,045,14476,047,53823951
Exon76,060,80376,061,0182161
Exon76,063,83876,064,0041670
Exon76,067,16676,067,246810
Exon76,069,11876,069,175581
Exon76,071,21776,071,3591430
Exon76,073,26676,073,4151500
Exon76,075,47676,075,6221470
Exon76,079,12876,079,2471200
Exon76,082,58476,082,667840
Exon76,082,93476,083,1742411
Exon76,087,52176,087,6881681
Exon76,089,01476,089,2051921
Exon76,089,70176,089,8441441
Exon76,094,42476,094,6181951
Exon76,098,55576,098,625710
Exon76,099,49576,099,6341402
Exon76,100,56676,100,9263610
UTR76,100,92776,104,916