TCF4 - transcription factor 4

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 4 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P15884 HGNC Approved Gene Symbol: TCF4 
Ensembl ENSG00000196628 
Synonyms : SEF2-1B, ITF2, bHLHb19, E2-2
HgncId : HGNC:11634  Omim: 602272 
Refseq: NM_003199  GenBank: M74719 
 
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

TCF4 Gene Structure

Chromosome: chr18
Genbank ID: NM_003199 Orientation: -
Length coding sequence : 2001 nucleotides.
Regionstartendregion lengthphase at end
UTR53,255,26853,255,860
UTR
53,254,34853,254,367
Exon53,254,27653,254,347720
Exon53,252,51153,252,583731
Exon53,131,30753,131,368620
Exon53,128,25053,128,346971
Exon53,070,68553,070,749650
Exon53,018,10553,018,2341301
Exon53,017,59053,017,639500
Exon52,946,78252,946,8871061
Exon52,942,85052,942,9831340
Exon52,937,06252,937,1941331
Exon52,928,69752,928,764680
Exon52,927,18052,927,258791
Exon52,924,54652,924,622770
Exon52,921,72852,921,9312040
Exon52,901,77952,901,9141361
Exon52,899,75252,899,9021512
Exon52,896,07852,896,3072301
Exon52,895,45652,895,5921370
UTR
52,895,45252,895,455
UTR52,889,56152,895,261