TBP - TATA-box binding protein

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 22 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P20226 HGNC Approved Gene Symbol: TBP 
Previous Symbols: GTF2D1, SCA17 Ensembl ENSG00000112592 
Synonyms : TFIID
HgncId : HGNC:11588  Omim: 600075 
Refseq: NM_003194  GenBank: M55654 
 
Genomic coordinates: Cytogenetic location: 6q27 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

TBP Gene Structure

Chromosome: chr6
Genbank ID: NM_003194 Orientation: +
Length coding sequence : 1017 nucleotides.
Regionstartendregion lengthphase at end
UTR170,865,969170,866,117
Exon170,866,118170,866,171540
Exon170,870,879170,871,3214432
Exon170,873,633170,873,720880
Exon170,876,006170,876,097922
Exon170,878,700170,878,8671682
Exon170,880,498170,880,592951
Exon170,881,274170,881,353800
UTR170,881,354170,881,958