TAX1BP1 - Tax1 binding protein 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 8 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q86VP1 HGNC Approved Gene Symbol: TAX1BP1 
Ensembl ENSG00000106052 
Synonyms : TXBP151, CALCOCO3 Previous Names: "Tax1 (human T-cell leukemia virus type I) binding protein 1"
HgncId : HGNC:11575  Omim: 605326 
Refseq: NM_006024  GenBank: U33821 
 
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

TAX1BP1 Gene Structure

Chromosome: chr7
Genbank ID: NM_006024 Orientation: +
Length coding sequence : 2367 nucleotides.
Regionstartendregion lengthphase at end
UTR27,788,13627,788,143
Exon27,788,14427,788,3051620
Exon27,797,65027,797,7521031
Exon27,805,45327,805,6401880
Exon27,809,29527,809,4531590
Exon27,824,78227,824,9301492
Exon27,825,01827,825,108910
Exon27,827,03727,827,2221860
Exon27,831,62527,831,8492250
Exon27,832,68527,832,8311470
Exon27,833,94227,834,0651241
Exon27,835,73527,835,8381040
Exon27,839,58427,839,7091260
Exon27,855,96827,856,1391721
Exon27,856,50927,856,6571490
Exon27,867,35727,867,439832
Exon27,868,24727,868,4482020
UTR27,868,44927,869,386