TAF4 - TATA-box binding protein associated factor 4

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 6 View list of all current human gene IDs
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Cross References
UniProt: O00268 HGNC Approved Gene Symbol: TAF4 
Previous Symbols: TAF4A, TAF2C1, TAF2C Ensembl ENSG00000130699 
Synonyms : TAFII130, TAFII135 Previous Names: "TATA box binding protein (TBP)-associated factor, RNA polymerase II, C1, 130kD", "TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa"
HgncId : HGNC:11537  Omim: 601796 
Refseq: NM_003185  GenBank: Y11354 
 
Genomic coordinates: Cytogenetic location: 20q13.33 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

TAF4 Gene Structure

Chromosome: chr20
Genbank ID: NM_003185 Orientation: -
Length coding sequence : 3255 nucleotides.
Regionstartendregion lengthphase at end
UTR
60,640,86760,640,866
Exon60,639,50760,640,86613601
Exon60,589,60360,589,7631610
Exon60,587,87160,587,9901200
Exon60,585,10260,585,2211200
Exon60,584,10860,584,2301230
Exon60,582,60360,582,692900
Exon60,581,56660,581,8142490
Exon60,578,78760,578,9341481
Exon60,578,21660,578,3301152
Exon60,575,60860,575,7771701
Exon60,575,18060,575,3101310
Exon60,574,03960,574,1641260
Exon60,573,19260,573,248570
Exon60,572,60660,572,7251200
Exon60,551,22460,551,3911680
UTR
60,549,85460,551,223