TAF12 - TATA-box binding protein associated factor 12

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 5 View list of all current human gene IDs
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Cross References
UniProt: Q16514 HGNC Approved Gene Symbol: TAF12 
Previous Symbols: TAF2J Ensembl ENSG00000120656 
Synonyms : TAFII20 Previous Names: "TATA box binding protein (TBP)-associated factor, RNA polymerase II, J, 20kD", "TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa"
HgncId : HGNC:11545  Omim: 600773 
Refseq: NM_005644  GenBank: BC011986 
 
Genomic coordinates: Cytogenetic location: 1p35.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

TAF12 Gene Structure

Chromosome: chr1
Genbank ID: NM_005644 Orientation: -
Length coding sequence : 483 nucleotides.
Regionstartendregion lengthphase at end
UTR28,969,50328,969,604
UTR
28,948,59428,948,677
Exon28,948,42628,948,5931680
Exon28,944,46528,944,542780
Exon28,939,75928,939,8731151
Exon28,931,88428,931,972890
Exon28,930,05128,930,086360
UTR
28,929,60928,930,050