TAF11 - TATA-box binding protein associated factor 11

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 4 View list of all current human gene IDs
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Cross References
UniProt: Q15544 HGNC Approved Gene Symbol: TAF11 
Previous Symbols: TAF2I Ensembl ENSG00000064995 
Synonyms : TAFII28 Previous Names: "TATA box binding protein (TBP)-associated factor, RNA polymerase II, I, 28kD", "TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa"
HgncId : HGNC:11544  Omim: 600772 
Refseq: NM_005643  GenBank: X83928 
 
Genomic coordinates: Cytogenetic location: 6p21.31 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

TAF11 Gene Structure

Chromosome: chr6
Genbank ID: NM_005643 Orientation: -
Length coding sequence : 633 nucleotides.
Regionstartendregion lengthphase at end
UTR
34,855,73534,855,848
Exon34,855,56434,855,7341710
Exon34,850,70934,850,8571492
Exon34,848,06634,848,153880
Exon34,847,74434,847,840971
Exon34,846,36734,846,4971310
UTR
34,845,55534,846,366