SYNCRIP - synaptotagmin binding cytoplasmic RNA interacting protein

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 3 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O60506 HGNC Approved Gene Symbol: SYNCRIP 
Ensembl ENSG00000135316 
Synonyms : NSAP1, GRY-RBP, dJ3J17.2, HNRPQ1, hnRNP-Q, HNRNPQ
HgncId : HGNC:16918  Omim: 616686 
Refseq: NM_006372  GenBank: AF037448 
 
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SYNCRIP Gene Structure

Chromosome: chr6
Genbank ID: NM_006372 Orientation: -
Length coding sequence : 1869 nucleotides.
Regionstartendregion lengthphase at end
UTR86,352,51486,353,043
UTR
86,351,15886,351,169
Exon86,351,01086,351,1571481
Exon86,350,16486,350,2821190
Exon86,349,93986,350,0461080
Exon86,346,96186,347,0741140
Exon86,346,68586,346,8611770
Exon86,333,69586,333,8301361
Exon86,332,20086,332,4052060
Exon86,328,98686,329,1351500
Exon86,328,53686,328,6571222
Exon86,324,47486,325,0655920
UTR
86,323,69386,324,473