SUPT5H - SPT5 homolog, DSIF elongation factor subunit

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 13 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O00267 HGNC Approved Gene Symbol: SUPT5H 
Ensembl ENSG00000196235 
Synonyms : SPT5H, SPT5, FLJ34157 Previous Names: "suppressor of Ty (S.cerevisiae) 5 homolog", "suppressor of Ty 5 homolog (S. cerevisiae)"
HgncId : HGNC:11469  Omim: 602102 
Refseq: NM_003169  GenBank: U56402 
 
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SUPT5H Gene Structure

Chromosome: chr19
Genbank ID: NM_003169 Orientation: +
Length coding sequence : 3261 nucleotides.
Regionstartendregion lengthphase at end
UTR39,936,28739,936,530
Exon39,936,53139,936,605750
Exon39,943,99639,944,1611661
Exon39,948,31539,948,380661
Exon39,948,93439,948,945121
Exon39,949,45839,949,527702
Exon39,949,64539,949,713692
Exon39,949,82439,949,889662
Exon39,950,19939,950,229310
Exon39,950,53239,950,600690
Exon39,955,43839,955,6892520
Exon39,957,12039,957,209900
Exon39,957,31539,957,385712
Exon39,959,39639,959,5011060
Exon39,959,71939,959,812941
Exon39,959,90239,960,0381370
Exon39,960,75939,960,9141560
Exon39,961,01739,961,1631470
Exon39,961,99739,962,1431470
Exon39,962,24539,962,3701260
Exon39,963,04939,963,133851
Exon39,963,45039,963,5691201
Exon39,963,65239,963,7541032
Exon39,963,84339,963,9701281
Exon39,964,05639,964,1611062
Exon39,964,60339,964,7611592
Exon39,964,87439,965,0421690
Exon39,965,15539,965,3582040
Exon39,966,72139,966,816960
Exon39,966,89639,967,0391440
UTR39,967,04039,967,308