SPTAN1 - spectrin alpha, non-erythrocytic 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 6 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q13813 HGNC Approved Gene Symbol: SPTAN1 
Ensembl ENSG00000197694 
HgncId : HGNC:11273  Omim: 182810 
Refseq: NM_003127  GenBank: M19725 
 
Genomic coordinates: Cytogenetic location: 9q34.11 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SPTAN1 Gene Structure

Chromosome: chr9
Genbank ID: NM_003127 Orientation: +
Length coding sequence : 7416 nucleotides.
Regionstartendregion lengthphase at end
UTR131,329,016131,329,019
Exon131,329,020131,329,2562370
Exon131,331,051131,331,1761260
Exon131,336,954131,337,0941410
Exon131,337,478131,337,6241470
Exon131,339,102131,339,2351342
Exon131,339,408131,339,5521450
Exon131,339,631131,339,7851552
Exon131,340,389131,340,5241360
Exon131,341,916131,342,0171020
Exon131,343,201131,343,3381380
Exon131,344,061131,344,1711110
Exon131,344,758131,344,835780
Exon131,344,973131,345,1281560
Exon131,345,356131,345,5602051
Exon131,346,067131,346,2481820
Exon131,346,561131,346,8042441
Exon131,347,000131,347,1221231
Exon131,348,027131,348,2442180
Exon131,349,885131,349,977930
Exon131,351,088131,351,2221350
Exon131,353,756131,353,9041492
Exon131,355,262131,355,321602
Exon131,356,454131,356,6521990
Exon131,360,679131,360,7831050
Exon131,361,242131,361,265240
Exon131,362,359131,362,394360
Exon131,365,822131,365,869480
Exon131,366,605131,366,696922
Exon131,367,313131,367,4571450
Exon131,367,575131,367,7561822
Exon131,369,883131,369,9821000
Exon131,370,131131,370,3281980
Exon131,370,409131,370,5551470
Exon131,371,153131,371,2561042
Exon131,371,401131,371,5631630
Exon131,373,993131,374,1241320
Exon131,374,388131,374,5251380
Exon131,375,660131,375,7641050
Exon131,377,911131,378,1192092
Exon131,379,919131,380,0391210
Exon131,380,266131,380,3871222
Exon131,381,150131,381,2821330
Exon131,383,437131,383,535990
Exon131,386,607131,386,7661601
Exon131,387,382131,387,458770
Exon131,388,048131,388,2572100
Exon131,388,670131,388,9662970
Exon131,389,665131,389,7771132
Exon131,390,204131,390,221182
Exon131,392,600131,392,654550
Exon131,394,406131,394,6021972
Exon131,394,710131,394,763542
Exon131,394,851131,394,9971472
Exon131,395,087131,395,2341480
Exon131,395,488131,395,6131260
UTR131,395,614131,395,944