SPP1 - secreted phosphoprotein 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 2 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P10451 HGNC Approved Gene Symbol: SPP1 
Previous Symbols: BNSP, OPN Ensembl ENSG00000118785 
Synonyms : BSPI, ETA-1 Previous Names: "osteopontin", "bone sialoprotein I"
HgncId : HGNC:11255  Omim: 166490 
 
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SPP1 Gene Structure

Chromosome: chr4
Genbank ID: NM_000582 Orientation: +
Length coding sequence : 900 nucleotides.
Regionstartendregion lengthphase at end
UTR88,898,03388,898,047
Exon88,898,04888,898,101540
Exon88,898,21188,898,249390
Exon88,901,19888,901,278810
Exon88,902,62788,902,9503240
Exon88,903,64488,904,0484050
UTR88,904,04988,904,563