SOS1 - SOS Ras/Rac guanine nucleotide exchange factor 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 60 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q07889 HGNC Approved Gene Symbol: SOS1 
Previous Symbols: GINGF Ensembl ENSG00000115904 
Synonyms : HGF, GF1 Previous Names: "gingival fibromatosis, hereditary, 1", "son of sevenless homolog 1 (Drosophila)"
HgncId : HGNC:11187  Omim: 182530 
Refseq: NM_005633  GenBank: L13857 
 
Genomic coordinates: Cytogenetic location: 2p22.1 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SOS1 Gene Structure

Chromosome: chr2
Genbank ID: NM_005633 Orientation: -
Length coding sequence : 3999 nucleotides.
Regionstartendregion lengthphase at end
UTR
39,347,56439,347,604
Exon39,347,47739,347,563870
Exon39,294,76939,294,8941260
Exon39,285,81439,285,9451320
Exon39,283,84339,284,0071650
Exon39,281,75539,281,9642100
Exon39,278,28539,278,4281440
Exon39,262,53139,262,6411110
Exon39,262,35339,262,451990
Exon39,251,15139,251,2781282
Exon39,249,71139,250,3666561
Exon39,241,90639,241,987822
Exon39,241,00839,241,1301232
Exon39,240,60139,240,7041041
Exon39,239,26739,239,4892232
Exon39,237,72539,237,8441202
Exon39,234,17239,234,3341630
Exon39,233,55339,233,6701181
Exon39,224,39439,224,5661730
Exon39,224,06339,224,1791170
Exon39,222,26439,222,5282651
Exon39,216,41139,216,455451
Exon39,214,61439,214,7321190
Exon39,212,96539,213,4564920
UTR
39,208,69039,212,964