SMARCB1 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 8 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q12824 HGNC Approved Gene Symbol: SMARCB1 
Previous Symbols: SNF5L1 Ensembl ENSG00000099956 
Synonyms : BAF47, Ini1, Snr1, hSNFS, Sfh1p, RDT, PPP1R144
HgncId : HGNC:11103  Omim: 601607 
Refseq: NM_003073  GenBank: U04847 
 
Genomic coordinates: Cytogenetic location: 22q11.23 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SMARCB1 Gene Structure

Chromosome: chr22
Genbank ID: NM_003073 Orientation: +
Length coding sequence : 1155 nucleotides.
Regionstartendregion lengthphase at end
UTR24,129,11724,129,356
Exon24,129,35724,129,449930
Exon24,133,94324,134,0811391
Exon24,135,74624,135,8751302
Exon24,143,13124,143,2681382
Exon24,145,48224,145,6091281
Exon24,158,95724,159,1231670
Exon24,167,41224,167,6021912
Exon24,175,75924,175,8901322
Exon24,176,32824,176,367400
UTR24,176,36824,176,705