RPN2 - ribophorin II

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: no matching PDB entities View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P04844 HGNC Approved Gene Symbol: RPN2 
Ensembl ENSG00000118705 
Synonyms : SWP1, RPNII, RIBIIR, RPN-II
HgncId : HGNC:10382  Omim: 180490 
Refseq: NM_002951  GenBank: Y00282 
 
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

RPN2 Gene Structure

Chromosome: chr20
Genbank ID: NM_002951 Orientation: +
Length coding sequence : 1893 nucleotides.
Regionstartendregion lengthphase at end
UTR37,179,04537,179,356
Exon37,179,35737,179,369131
Exon37,184,18037,184,3731940
Exon37,198,39737,198,492960
Exon37,199,05037,199,2251762
Exon37,203,88537,203,960760
Exon37,204,76737,204,9011350
Exon37,207,27337,207,4491770
Exon37,210,04737,210,1651192
Exon37,213,76037,213,8651060
Exon37,223,87837,223,969922
Exon37,225,68837,225,8021150
Exon37,228,55037,228,7441950
Exon37,229,97337,230,059870
Exon37,232,29637,232,391960
Exon37,234,02037,234,095761
Exon37,236,58037,236,7091302
Exon37,241,30337,241,315130
UTR37,241,31637,241,622