RPN2 - ribophorin II

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: no matching PDB entities View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P04844 HGNC Approved Gene Symbol: RPN2 
Ensembl ENSG00000118705 
Synonyms : SWP1, RPNII, RIBIIR, RPN-II
HgncId : HGNC:10382  Omim: 180490 
Refseq: NM_002951  GenBank: Y00282 
 
Currently highlighted: Genomic position: chr20:35,838,450 View in genomic position mapping tool
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

RPN2 Gene Structure

Chromosome: chr20
Genbank ID: NM_002951 Orientation: +
Length coding sequence : 1893 nucleotides.
Regionstartendregion lengthphase at end
UTR35,807,44835,807,759
Exon35,807,76035,807,772131
Exon35,812,58335,812,7761940
Exon35,826,80035,826,895960
Exon35,827,45335,827,6281762
Exon35,832,28835,832,363760
Exon35,833,17035,833,3041350
Exon35,835,67635,835,8521770
Exon35,838,45035,838,5681192
Exon35,842,16335,842,2681060
Exon35,852,28135,852,372922
Exon35,854,09135,854,2051150
Exon35,856,95335,857,1471950
Exon35,858,37635,858,462870
Exon35,860,69935,860,794960
Exon35,862,42335,862,498761
Exon35,864,98335,865,1121302
Exon35,869,70635,869,718130
UTR35,869,71935,870,025