RPA1 - replication protein A1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 28 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P27694 HGNC Approved Gene Symbol: RPA1 
Ensembl ENSG00000132383 
Synonyms : REPA1, RPA70, HSSB, RF-A, RP-A Previous Names: "replication protein A1 (70kD)", "replication protein A1, 70kDa"
HgncId : HGNC:10289  Omim: 179835 
Refseq: NM_002945  GenBank: M63488 
 
Genomic coordinates: Cytogenetic location: 17p13.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

RPA1 Gene Structure

Chromosome: chr17
Genbank ID: NM_002945 Orientation: +
Length coding sequence : 1848 nucleotides.
Regionstartendregion lengthphase at end
UTR1,733,2721,733,387
Exon1,733,3881,733,420330
Exon1,746,0971,746,147510
Exon1,747,2141,747,292791
Exon1,747,8721,747,9801092
Exon1,756,3951,756,483891
Exon1,775,7281,775,820931
Exon1,778,9551,779,0871332
Exon1,780,5061,780,6081030
Exon1,782,2871,782,355690
Exon1,782,5091,782,7011931
Exon1,782,8541,782,9931400
Exon1,783,8371,783,9851492
Exon1,787,1061,787,2381330
Exon1,791,9691,792,1451770
Exon1,795,1271,795,2341080
Exon1,798,3031,798,389870
Exon1,800,3651,800,4691050
UTR1,800,4701,802,848