RET - ret proto-oncogene

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 24 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P07949 HGNC Approved Gene Symbol: RET 
Previous Symbols: HSCR1, MEN2A, MTC1, MEN2B Ensembl ENSG00000165731 
Synonyms : PTC, CDHF12, RET51, CDHR16 Previous Names: "multiple endocrine neoplasia and medullary thyroid carcinoma 1", "Hirschsprung disease 1"
HgncId : HGNC:9967  Omim: 164761 
Refseq: NM_020975  GenBank: BC004257 
 
Genomic coordinates: Cytogenetic location: 10q11.21 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

RET Gene Structure

Chromosome: chr10
Genbank ID: NM_020975 Orientation: +
Length coding sequence : 3342 nucleotides.
Regionstartendregion lengthphase at end
UTR43,572,51643,572,706
Exon43,572,70743,572,779731
Exon43,595,90743,596,1702641
Exon43,597,79043,598,0772881
Exon43,600,40043,600,6412420
Exon43,601,82443,602,0191961
Exon43,604,47943,604,6782000
Exon43,606,65543,606,9132591
Exon43,607,54743,607,6721261
Exon43,608,30143,608,4111111
Exon43,609,00443,609,1231201
Exon43,609,92843,610,1842570
Exon43,612,03243,612,1791481
Exon43,613,82143,613,9281081
Exon43,614,97943,615,1932150
Exon43,615,52943,615,6511230
Exon43,617,39443,617,464712
Exon43,619,11943,619,2561382
Exon43,620,33143,620,4301000
Exon43,622,02343,622,1701481
Exon43,623,56043,623,7171580
UTR43,623,71843,625,797