RAE1 - ribonucleic acid export 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 2 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P78406 HGNC Approved Gene Symbol: RAE1 
Ensembl ENSG00000101146 
Synonyms : Mnrp41 Previous Names: "RAE1 (RNA export 1, S.pombe) homolog", "RAE1 RNA export 1 homolog (S. pombe)"
HgncId : HGNC:9828  Omim: 603343 
GenBank: U84720 
 
Genomic coordinates: Cytogenetic location: 20q13.31 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

RAE1 Gene Structure

Chromosome: chr20
Genbank ID: NM_003610 Orientation: +
Length coding sequence : 1104 nucleotides.
Regionstartendregion lengthphase at end
UTR55,929,08755,929,094
Exon55,929,09555,929,184900
Exon55,929,76855,929,8721050
Exon55,931,50255,931,594930
Exon55,940,41255,940,498870
Exon55,941,86355,941,949870
Exon55,942,06455,942,135720
Exon55,943,76155,943,8681080
Exon55,948,53155,948,6371072
Exon55,948,71955,948,794760
Exon55,949,66355,949,8571950
Exon55,953,06955,953,155870
UTR55,953,15655,953,519