PSIP1 - PC4 and SFRS1 interacting protein 1

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for PSIP1 View list of all current human gene IDs
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Cross References
UniProt: O75475 HGNC Approved Gene Symbol: PSIP1 
Previous Symbols: PSIP2 Ensembl ENSG00000164985 
Synonyms : p52, LEDGF, p75, DFS70 Previous Names: "PC4 and SFRS1 interacting protein 2"
HgncId : HGNC:9527  Omim: 603620 
Refseq: NM_033222  GenBank: AF098482 
 
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PSIP1 Gene Structure

Chromosome: chr9
Genbank ID: NM_033222 Orientation: -
Length coding sequence : 1590 nucleotides.
Regionstartendregion lengthphase at end
UTR15,510,81415,511,017
UTR
15,510,18715,510,327
Exon15,510,11515,510,186720
Exon15,506,55915,506,635772
Exon15,489,98415,490,1221390
Exon15,486,82515,486,9291050
Exon15,486,00415,486,066630
Exon15,479,58915,479,685971
Exon15,478,47515,478,550762
Exon15,474,00715,474,2352290
Exon15,472,63015,472,7481192
Exon15,469,93615,469,991561
Exon15,469,26415,469,334710
Exon15,468,95515,469,0561020
Exon15,468,62815,468,8412141
Exon15,466,74615,466,8571122
Exon15,465,51815,465,578610
UTR
15,464,06515,465,517