PPT1 - palmitoyl-protein thioesterase 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P50897 HGNC Approved Gene Symbol: PPT1 
Previous Symbols: PPT Ensembl ENSG00000131238 
Synonyms : CLN1, INCL
HgncId : HGNC:9325  Omim: 600722 
Refseq: NM_000310  GenBank: U44772 
 
Genomic coordinates: Cytogenetic location: 1p34.2 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PPT1 Gene Structure

Chromosome: chr1
Genbank ID: NM_000310 Orientation: -
Length coding sequence : 918 nucleotides.
Regionstartendregion lengthphase at end
UTR
40,562,91140,563,142
Exon40,562,78740,562,9101241
Exon40,558,07040,558,1791100
Exon40,557,71740,557,8441282
Exon40,557,00140,557,071711
Exon40,555,08240,555,1841032
Exon40,546,06940,546,159910
Exon40,544,23240,544,330990
Exon40,542,51440,542,585720
Exon40,539,73340,539,8551230
UTR
40,538,38240,539,732