PPARGC1A - PPARG coactivator 1 alpha

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 19 View list of all current human gene IDs
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Cross References
UniProt: Q9UBK2 HGNC Approved Gene Symbol: PPARGC1A 
Previous Symbols: PPARGC1 Ensembl ENSG00000109819 
Synonyms : PGC1, PGC1A, PGC-1alpha Previous Names: "peroxisome proliferative activated receptor, gamma, coactivator 1", "peroxisome proliferative activated receptor, gamma, coactivator 1, alpha", "peroxisome proliferator-activated receptor gamma, coactivator 1 alpha"
HgncId : HGNC:9237  Omim: 604517 
Refseq: NM_013261  GenBank: AF106698 
 
Genomic coordinates: Cytogenetic location: 4p15.2 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PPARGC1A Gene Structure

Chromosome: chr4
Genbank ID: NM_013261 Orientation: -
Length coding sequence : 2394 nucleotides.
Regionstartendregion lengthphase at end
UTR
23,891,58123,891,700
Exon23,891,52723,891,580540
Exon23,886,37523,886,5541800
Exon23,833,18023,833,3741950
Exon23,831,08623,831,2081230
Exon23,830,02323,830,2272051
Exon23,826,08623,826,131462
Exon23,825,90323,825,976741
Exon23,815,31323,816,2289162
Exon23,814,64423,814,7481052
Exon23,814,37023,814,4901210
Exon23,803,84723,803,9681222
Exon23,803,35323,803,5041521
Exon23,797,44523,797,5481040
UTR
23,793,64423,797,444