PHGDH - phosphoglycerate dehydrogenase

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 17 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O43175 HGNC Approved Gene Symbol: PHGDH 
Ensembl ENSG00000092621 
Synonyms : SERA, PGDH, PDG
HgncId : HGNC:8923  Omim: 606879 
Refseq: NM_006623  GenBank: BC011262 
 
Genomic coordinates: Cytogenetic location: 1p12 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PHGDH Gene Structure

Chromosome: chr1
Genbank ID: NM_006623 Orientation: +
Length coding sequence : 1599 nucleotides.
Regionstartendregion lengthphase at end
UTR120,254,418120,254,645
Exon120,254,646120,254,7831380
Exon120,263,793120,263,9441522
Exon120,265,999120,266,064662
Exon120,269,474120,269,528550
Exon120,269,627120,269,725990
Exon120,277,257120,277,3891331
Exon120,277,918120,278,0661490
Exon120,279,737120,279,8891530
Exon120,283,009120,283,1411331
Exon120,284,390120,284,5201310
Exon120,285,430120,285,6672381
Exon120,286,509120,286,6631550
UTR120,286,664120,286,849