PCLO - piccolo presynaptic cytomatrix protein

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9Y6V0 HGNC Approved Gene Symbol: PCLO 
Ensembl ENSG00000186472 
Synonyms : KIAA0559, DKFZp779G1236, ACZ Previous Names: "piccolo (presynaptic cytomatrix protein)"
HgncId : HGNC:13406  Omim: 604918 
Refseq: NM_014510  GenBank: AB011131 
 
Genomic coordinates: Cytogenetic location: 7q21.11 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PCLO Gene Structure

Chromosome: chr7
Genbank ID: NM_014510 Orientation: -
Length coding sequence : 14805 nucleotides.
Regionstartendregion lengthphase at end
UTR
82,791,90982,792,197
Exon82,791,66182,791,9082482
Exon82,784,06482,785,70816450
Exon82,763,56682,764,97214070
Exon82,595,08782,595,8037170
Exon82,581,17282,586,25150801
Exon82,578,79282,580,80620150
Exon82,544,00282,546,18921881
Exon82,538,19382,538,3291370
Exon82,531,96782,532,057911
Exon82,508,65382,508,7781261
Exon82,476,45582,476,5631092
Exon82,475,88382,475,950681
Exon82,474,58782,474,8012150
Exon82,470,77582,470,825510
Exon82,467,53482,467,6581252
Exon82,464,98382,465,009272
Exon82,457,18982,457,282940
Exon82,455,90582,455,976720
Exon82,453,55282,453,7321811
Exon82,451,79482,452,0052120
UTR
82,449,79682,451,793