PBRM1 - polybromo 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for PBRM1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q86U86 HGNC Approved Gene Symbol: PBRM1 
Ensembl ENSG00000163939 
Synonyms : BAF180, PB1
HgncId : HGNC:30064  Omim: 606083 
Refseq: NM_018165  GenBank: BC015323 
 
Genomic coordinates: Cytogenetic location: 3p21.1 reset view
Fullscreen
Dalliance goes here...

This feature requires an up-to-date web browser.

Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PBRM1 Gene Structure

Chromosome: chr3
Genbank ID: NM_018313 Orientation: -
Length coding sequence : 4746 nucleotides.
Regionstartendregion lengthphase at end
UTR52,719,76452,719,866
UTR
52,713,72852,713,739
Exon52,713,59052,713,7271380
Exon52,712,51652,712,613982
Exon52,702,51452,702,6611480
Exon52,696,14952,696,2921440
Exon52,692,21552,692,3311170
Exon52,685,75852,685,826690
Exon52,682,36052,682,458990
Exon52,678,72052,678,805862
Exon52,677,26452,677,359962
Exon52,675,97052,676,061921
Exon52,668,61852,668,8312142
Exon52,662,91052,663,0511420
Exon52,661,28952,661,386982
Exon52,651,27852,651,5542770
Exon52,649,36752,649,4721061
Exon52,643,32952,643,9716432
Exon52,637,53752,637,7482121
Exon52,623,08652,623,2711861
Exon52,621,36952,621,451830
Exon52,620,44152,620,7042640
Exon52,613,07052,613,2151462
Exon52,610,55752,610,7141581
Exon52,598,06652,598,2491842
Exon52,597,38052,597,5091300
Exon52,595,78352,595,9842021
Exon52,588,74052,588,8951561
Exon52,584,76352,584,833710
Exon52,584,43752,584,6532171
Exon52,582,07952,582,2511730
UTR
52,579,36852,582,078