PABPC1 - poly(A) binding protein cytoplasmic 1

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 28 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P11940 HGNC Approved Gene Symbol: PABPC1 
Previous Symbols: PAB1, PABPC2 Ensembl ENSG00000070756 
Synonyms : PABP1, PABPL1 Previous Names: "poly(A)-binding protein, cytoplasmic 2"
HgncId : HGNC:8554  Omim: 604679 
Refseq: NM_002568  GenBank: Y00345 
 
Genomic coordinates: Cytogenetic location: 8q22.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PABPC1 Gene Structure

Chromosome: chr8
Genbank ID: NM_002568 Orientation: -
Length coding sequence : 1908 nucleotides.
Regionstartendregion lengthphase at end
UTR
101,733,812101,734,315
Exon101,733,619101,733,8111931
Exon101,730,315101,730,5081940
Exon101,730,001101,730,1161162
Exon101,727,690101,727,8291401
Exon101,725,315101,725,409950
Exon101,724,880101,725,0171380
Exon101,724,590101,724,685960
Exon101,721,687101,721,9592730
Exon101,721,361101,721,451911
Exon101,719,115101,719,2251111
Exon101,718,879101,719,0331550
Exon101,717,817101,717,901851
Exon101,717,154101,717,2841310
Exon101,716,526101,716,618930
UTR
101,716,525101,716,525
UTR101,715,143101,715,587