OXCT1 - 3-oxoacid CoA-transferase 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P55809 HGNC Approved Gene Symbol: OXCT1 
Previous Symbols: OXCT Ensembl ENSG00000083720 
Synonyms : SCOT Previous Names: "3-oxoacid CoA transferase", "3-oxoacid CoA transferase 1"
HgncId : HGNC:8527  Omim: 601424 
Refseq: NM_000436  GenBank: U62961 
 
Genomic coordinates: Cytogenetic location: 5p13.1 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

OXCT1 Gene Structure

Chromosome: chr5〉e=41794779
Genbank ID: NM_000436 Orientation: -
Length coding sequence : 1560 nucleotides.
Regionstartendregion lengthphase at end
UTR
41,870,46141,870,791
Exon41,870,38341,870,460780
Exon41,862,74441,862,8521091
Exon41,861,41641,861,506912
Exon41,853,52141,853,6561360
Exon41,850,13241,850,2811500
Exon41,842,77741,842,8831072
Exon41,840,55341,840,613610
Exon41,807,43341,807,5401080
Exon41,805,66941,805,7831151
Exon41,803,17141,803,265950
Exon41,801,12441,801,172491
Exon41,794,77941,794,851732
Exon41,794,10541,794,180760
Exon41,762,21341,762,302900
Exon41,749,62941,749,709810
Exon41,739,49241,739,5931020
Exon41,731,83141,731,872420
UTR
41,730,16741,731,830