NUP214 - nucleoporin 214

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 5 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P35658 HGNC Approved Gene Symbol: NUP214 
Ensembl ENSG00000126883 
Synonyms : CAIN, CAN, D9S46E, N214 Previous Names: "nucleoporin 214kD (CAIN)", "nucleoporin 214kDa"
HgncId : HGNC:8064  Omim: 114350 
Refseq: NM_005085  GenBank: X64228 
 
Genomic coordinates: Cytogenetic location: 9q34.13 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

NUP214 Gene Structure

Chromosome: chr9
Genbank ID: NM_005085 Orientation: +
Length coding sequence : 6270 nucleotides.
Regionstartendregion lengthphase at end
UTR134,000,947134,001,091
Exon134,001,092134,001,136450
Exon134,002,911134,003,1061961
Exon134,003,719134,003,8701520
Exon134,004,666134,004,8641991
Exon134,006,153134,006,223710
Exon134,007,983134,008,046641
Exon134,008,493134,008,5961040
Exon134,010,285134,010,3911072
Exon134,011,327134,011,393670
Exon134,014,668134,014,7941271
Exon134,015,936134,016,0971621
Exon134,019,667134,020,1414752
Exon134,021,516134,021,6911761
Exon134,022,877134,022,971950
Exon134,025,711134,025,797870
Exon134,026,003134,026,1521500
Exon134,027,123134,027,2811590
Exon134,034,770134,034,8731042
Exon134,038,378134,038,5601832
Exon134,039,257134,039,342861
Exon134,039,448134,039,531841
Exon134,049,442134,049,7052641
Exon134,050,847134,051,0081621
Exon134,053,698134,053,7971002
Exon134,062,676134,062,751760
Exon134,064,440134,064,518791
Exon134,067,595134,067,679852
Exon134,070,620134,070,681621
Exon134,072,603134,074,40218001
Exon134,077,034134,077,104710
Exon134,090,599134,090,7551571
Exon134,098,165134,098,3171531
Exon134,103,547134,103,7181722
Exon134,106,017134,106,1561401
Exon134,107,671134,107,695252
Exon134,108,841134,108,874340
UTR134,108,875134,110,057