NUP153 - nucleoporin 153

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for NUP153 View list of all current human gene IDs
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Cross References
UniProt: P49790 HGNC Approved Gene Symbol: NUP153 
Ensembl ENSG00000124789 
Synonyms : HNUP153 Previous Names: "nucleoporin 153kDa"
HgncId : HGNC:8062  Omim: 603948 
GenBank: Z25535 
 
Genomic coordinates: Cytogenetic location: 6p22.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

NUP153 Gene Structure

Chromosome: chr6
Genbank ID: NM_001278209 Orientation: -
Length coding sequence : 4518 nucleotides.
Regionstartendregion lengthphase at end
UTR
17,706,61917,707,065
Exon17,706,50817,706,6181110
Exon17,688,62717,688,8492231
Exon17,675,75317,676,0012491
Exon17,675,46017,675,5991400
Exon17,675,13617,675,2641290
Exon17,669,66117,669,7771170
Exon17,669,52417,669,568450
Exon17,669,20617,669,259540
Exon17,665,47017,665,6161470
Exon17,662,24917,662,301532
Exon17,661,88417,662,0101270
Exon17,652,06517,652,157930
Exon17,649,39417,649,5311380
Exon17,648,03817,648,136990
Exon17,646,29817,646,385881
Exon17,640,17017,640,2951261
Exon17,637,38417,638,0016181
Exon17,632,88117,633,0751951
Exon17,628,88617,629,7708851
Exon17,626,03917,626,3953571
Exon17,624,79217,625,0642731
Exon17,616,75817,616,9261692
Exon17,616,32817,616,412850
UTR
17,615,26617,616,327