NECTIN1 - nectin cell adhesion molecule 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 6 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q15223 HGNC Approved Gene Symbol: NECTIN1 
Previous Symbols: HVEC, ED4, PVRL1 Ensembl ENSG00000110400 
Synonyms : PRR, PRR1, PVRR1, SK-12, HIgR, CLPED1, CD111, OFC7 Previous Names: "poliovirus receptor-related 1 (herpesvirus entry mediator C)"
HgncId : HGNC:9706  Omim: 600644 
GenBank: X76400 
 
Genomic coordinates: Cytogenetic location: 11q23.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

NECTIN1 Gene Structure

Chromosome: chr11
Genbank ID: NM_203285 Orientation: -
Length coding sequence : 1374 nucleotides.
Regionstartendregion lengthphase at end
UTR
119,599,264119,599,435
Exon119,599,185119,599,263791
Exon119,549,125119,549,4753511
Exon119,548,265119,548,5673031
Exon119,547,812119,547,9291182
Exon119,545,869119,546,0201521
Exon119,510,575119,510,7221482
Exon119,509,441119,509,516760
Exon119,508,808119,508,9571500
UTR
119,508,808119,508,807