MSH3 - mutS homolog 3

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 4 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P20585 HGNC Approved Gene Symbol: MSH3 
Ensembl ENSG00000113318 
Synonyms : DUP, MRP1 Previous Names: "mutS (E. coli) homolog 3", "mutS homolog 3 (E. coli)"
HgncId : HGNC:7326  Omim: 600887 
Refseq: NM_002439  GenBank: U61981 
 
Genomic coordinates: Cytogenetic location: 5q14.1 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

MSH3 Gene Structure

Chromosome: chr5
Genbank ID: NM_002439 Orientation: +
Length coding sequence : 3411 nucleotides.
Regionstartendregion lengthphase at end
UTR79,950,46679,950,546
Exon79,950,54779,950,7832370
Exon79,952,23079,952,3501211
Exon79,960,96279,961,1822210
Exon79,965,91679,966,1282130
Exon79,968,06379,968,1791170
Exon79,968,56079,968,6771181
Exon79,970,80279,970,9471460
Exon79,974,74679,974,9121672
Exon80,021,27280,021,3841131
Exon80,024,67080,024,7841152
Exon80,037,28380,037,367850
Exon80,040,32580,040,4341102
Exon80,057,36580,057,4971330
Exon80,063,75280,063,9391882
Exon80,064,65480,064,8221690
Exon80,071,51380,071,577652
Exon80,074,53980,074,6551172
Exon80,083,38480,083,4911082
Exon80,088,55280,088,6631120
Exon80,109,40380,109,5601582
Exon80,149,94980,150,1351870
Exon80,160,63280,160,7611301
Exon80,168,93580,169,1061722
Exon80,171,57080,171,6811120
UTR80,171,68280,172,634