MCPH1 - microcephalin 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 8 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q8NEM0 HGNC Approved Gene Symbol: MCPH1 
Ensembl ENSG00000147316 
Synonyms : FLJ12847, BRIT1 Previous Names: "microcephaly, primary autosomal recessive 1"
HgncId : HGNC:6954  Omim: 607117 
Refseq: NM_024596  GenBank: AK022909 
 
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

MCPH1 Gene Structure

Chromosome: chr8
Genbank ID: NM_024596 Orientation: +
Length coding sequence : 2505 nucleotides.
Regionstartendregion lengthphase at end
UTR6,264,1126,264,188
Exon6,264,1896,264,210221
Exon6,266,8006,266,891920
Exon6,272,2866,272,4041192
Exon6,289,0206,289,107880
Exon6,293,5696,293,6831151
Exon6,296,4746,296,6171441
Exon6,299,5886,299,677901
Exon6,301,9146,303,06811551
Exon6,312,6646,312,7731100
Exon6,335,1156,335,152382
Exon6,338,2356,338,3971630
Exon6,357,3736,357,450780
Exon6,478,9756,479,2122381
Exon6,500,5156,500,570560
UTR6,500,5716,506,026