MCOLN1 - mucolipin 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 8 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9GZU1 HGNC Approved Gene Symbol: MCOLN1 
Ensembl ENSG00000090674 
Synonyms : TRPML1, ML4, MLIV, MST080, MSTP080, TRPM-L1
HgncId : HGNC:13356  Omim: 605248 
Refseq: NM_020533  GenBank: AF249319 
 
Genomic coordinates: Cytogenetic location: 19p13.2 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

MCOLN1 Gene Structure

Chromosome: chr19
Genbank ID: NM_020533 Orientation: +
Length coding sequence : 1740 nucleotides.
Regionstartendregion lengthphase at end
UTR7,587,4957,587,636
Exon7,587,6377,587,667311
Exon7,589,8477,590,0522060
Exon7,591,3257,591,4921680
Exon7,591,6477,591,8121661
Exon7,592,4067,592,5141092
Exon7,592,7507,592,846970
Exon7,593,0447,593,1431001
Exon7,593,4837,593,5891070
Exon7,593,7077,593,8561500
Exon7,593,9877,594,0881020
Exon7,594,4767,594,5981230
Exon7,595,1727,595,3872160
Exon7,598,4097,598,5391312
Exon7,598,6457,598,681370
UTR7,598,6827,598,895