LSM6 - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 6 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P62312 HGNC Approved Gene Symbol: LSM6 
Ensembl ENSG00000164167 
Synonyms : YDR378C Previous Names: "LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)"
HgncId : HGNC:17017  Omim: 607286 
Refseq: NM_007080  GenBank: AF182292 
 
Genomic coordinates: Cytogenetic location: 4q31.22 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

LSM6 Gene Structure

Chromosome: chr4
Genbank ID: NM_007080 Orientation: +
Length coding sequence : 240 nucleotides.
Regionstartendregion lengthphase at end
UTR147,104,063147,104,073
Exon147,104,074147,104,167941
Exon147,108,426147,108,5391141
Exon147,110,774147,110,808350
UTR147,110,809147,111,213