LIMA1 - LIM domain and actin binding 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9UHB6 HGNC Approved Gene Symbol: LIMA1 
Ensembl ENSG00000050405 
Synonyms : EPLIN
HgncId : HGNC:24636  Omim: 608364 
Refseq: NM_016357  GenBank: AF198454 
 
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

LIMA1 Gene Structure

Chromosome: chr12
Genbank ID: NM_016357 Orientation: -
Length coding sequence : 2277 nucleotides.
Regionstartendregion lengthphase at end
UTR50,677,20250,677,353
UTR
50,642,53550,642,557
Exon50,642,41650,642,5341192
Exon50,625,44850,625,493460
Exon50,615,80450,616,2684650
Exon50,599,76750,599,851851
Exon50,598,33550,598,4831490
Exon50,594,56050,594,6671080
Exon50,589,61350,589,670581
Exon50,586,23550,586,3441100
Exon50,575,68750,575,8201342
Exon50,570,84750,571,85210060
UTR
50,569,56350,570,846