KNL1 - kinetochore scaffold 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 4 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q8NG31 HGNC Approved Gene Symbol: KNL1 
Previous Symbols: MCPH4, CASC5 Ensembl ENSG00000137812 
Synonyms : D40, AF15Q14, CT29, KIAA1570, hKNL-1, hSpc105, PPP1R55, Spc7 Previous Names: "microcephaly, primary autosomal recessive 4", "cancer susceptibility candidate 5"
HgncId : HGNC:24054  Omim: 609173 
Refseq: NM_144508  GenBank: AF173994 
 
Genomic coordinates: Cytogenetic location: 15q15.1 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

KNL1 Gene Structure

Chromosome: chr15
Genbank ID: NM_144508 Orientation: +
Length coding sequence : 6948 nucleotides.
Regionstartendregion lengthphase at end
UTR40,895,11240,895,129
Exon40,895,13040,895,164352
Exon40,897,30840,897,347400
Exon40,898,59140,898,650600
Exon40,901,04540,901,106622
Exon40,902,44340,902,495531
Exon40,903,67640,903,709342
Exon40,907,53940,907,576381
Exon40,911,15740,911,209530
Exon40,912,83840,917,83850010
Exon40,920,26840,920,4061391
Exon40,920,80940,920,876680
Exon40,921,47140,921,569990
Exon40,933,11040,933,2251162
Exon40,937,19540,937,285910
Exon40,937,85440,937,9701170
Exon40,939,18540,939,272881
Exon40,942,49940,942,576781
Exon40,942,74240,942,781402
Exon40,943,66940,943,7701022
Exon40,944,20340,944,3031011
Exon40,947,10740,947,175691
Exon40,949,24040,949,3491100
Exon40,949,55340,949,6711192
Exon40,951,53740,951,6591232
Exon40,954,27240,954,3861150
UTR40,954,38740,954,881