KDM2A - lysine demethylase 2A

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 5 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9Y2K7 HGNC Approved Gene Symbol: KDM2A 
Previous Symbols: FBXL11 Ensembl ENSG00000173120 
Synonyms : KIAA1004, FBL11, LILINA, DKFZP434M1735, FBL7, FLJ00115, CXXC8, JHDM1A Previous Names: "F-box and leucine-rich repeat protein 11", "lysine (K)-specific demethylase 2A"
HgncId : HGNC:13606  Omim: 605657 
Refseq: NM_012308  GenBank: BC047486 
 
Genomic coordinates: Cytogenetic location: 11q13.2 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

KDM2A Gene Structure

Chromosome: chr11
Genbank ID: NM_012308 Orientation: +
Length coding sequence : 3486 nucleotides.
Regionstartendregion lengthphase at end
UTR66,888,70466,888,787
Exon66,888,78866,888,829420
Exon66,947,55066,947,6881391
Exon66,948,79166,948,869792
Exon66,949,31766,949,363471
Exon66,974,98166,975,1591790
Exon66,982,81166,982,9171072
Exon66,983,32766,983,420940
Exon66,985,20266,985,3551541
Exon66,986,75966,986,8741160
Exon66,995,50866,995,6341271
Exon66,999,03766,999,4313950
Exon67,010,48067,010,563840
Exon67,012,66067,012,9292700
Exon67,013,45667,013,5871320
Exon67,015,75267,015,841900
Exon67,017,55767,018,2697132
Exon67,020,16567,020,3281641
Exon67,020,92467,021,0821591
Exon67,021,67467,021,8892161
Exon67,022,34567,022,5261820
UTR67,022,52767,025,550